miRNA display CGI


Results 1 - 20 of 68 are showing below:
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GenBank Identifier RefSeq Acc. Name
66392052 NC_007024.1 Xanthomonas campestris pv. pelargonii phage Xp15

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32351 - 35061 90 22 -36.42 5' arm      3' arm
32323 + 34974 89 24.5 -34.7 5' arm      3' arm
32354 - 40728 87 22 -32.6 YP_239315 5' arm      3' arm
32324 + 37320 89 25.5 -31.7 5' arm      3' arm
32355 - 43369 89 21 -31.7 5' arm      3' arm
32362 - 54866 90 23 -30.1 YP_239350 5' arm      3' arm
32320 + 33405 90 19.5 -30.1 YP_239307 5' arm      3' arm
32345 - 21817 90 20.5 -29.4 YP_239292 5' arm      3' arm
32353 - 40176 86 22.5 -29.1 YP_239314 5' arm      3' arm
32306 + 12805 89 20.5 -28.9 5' arm      3' arm
32358 - 47342 85 20.5 -28.9 YP_239326 5' arm      3' arm
32328 + 43281 89 21 -28.4 5' arm      3' arm
32348 - 26404 90 19.5 -27 5' arm      3' arm
32296 + 1448 89 20.5 -26.6 5' arm      3' arm
32321 + 33927 86 22.5 -26.5 YP_239308 5' arm      3' arm
32327 + 43035 90 20 -25.9 YP_239316 5' arm      3' arm
32295 + 260 90 22 -25.8 YP_239269 5' arm      3' arm
32311 + 17872 90 23 -25.7 YP_239291 5' arm      3' arm
32319 + 30925 79 23.5 -25.7 YP_239305 5' arm      3' arm
32316 + 25530 90 22.5 -25.6 YP_239297 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.