miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32316	+	25530	90	22.5	-25.6	YP_239297		5' arm      3' arm
32350	-	31456	86	19.5	-25.4			5' arm      3' arm
32301	+	8166	88	19.5	-25.4			5' arm      3' arm
32349	-	28921	90	22.5	-24.6	YP_239301		5' arm      3' arm
32309	+	17095	89	22	-24.6	YP_239289		5' arm      3' arm
32298	+	3855	90	20.5	-24.2	YP_239273		5' arm      3' arm
32341	-	12026	90	25	-24.1	YP_239284		5' arm      3' arm
32336	-	3938	77	21	-24	YP_239273		5' arm      3' arm
32352	-	35586	89	23.5	-23.9	YP_239310
32300	+	7123	84	21	-23.7	YP_239276		5' arm      3' arm
32337	-	8234	88	19.5	-23.7			5' arm
32304	+	9082	89	19	-23.6	YP_239278		5' arm      3' arm
32360	-	51382	85	22	-23.5	YP_239339		5' arm      3' arm
32343	-	19043	85	23.5	-23.4	YP_239291		3' arm
32332	-	2353	90	20	-23.3	YP_239272		5' arm      3' arm
32342	-	17874	86	19.5	-23.2	YP_239291		5' arm      3' arm
32297	+	2107	89	19	-23.2			5' arm      3' arm
32339	-	8685	90	24	-22.9	YP_239278		3' arm
32330	+	47258	85	23.5	-22.8	YP_239326		5' arm      3' arm
32313	+	22003	88	21.5	-22.6	YP_239292		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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