miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32299	+	6871	87	20.5	-19.7	YP_239276		5' arm      3' arm
32300	+	7123	84	21	-23.7	YP_239276		5' arm      3' arm
32302	+	8596	90	19.5	-20.8	YP_239278		5' arm      3' arm
32303	+	8695	90	20.5	-19.6	YP_239278		5' arm      3' arm
32304	+	9082	89	19	-23.6	YP_239278		5' arm      3' arm
32338	-	8554	85	19.5	-19.8	YP_239278		5' arm      3' arm
32339	-	8685	90	24	-22.9	YP_239278		3' arm
32340	-	9752	89	24	-19.7	YP_239279		5' arm      3' arm
32341	-	12026	90	25	-24.1	YP_239284		5' arm      3' arm
32305	+	12660	89	20	-21.6	YP_239285		5' arm      3' arm
32307	+	14055	82	20.5	-19.8	YP_239287		5' arm      3' arm
32308	+	14568	86	20.5	-21.7	YP_239287		5' arm      3' arm
32309	+	17095	89	22	-24.6	YP_239289		5' arm      3' arm
32344	-	21354	89	22	-20.7	YP_239291		5' arm      3' arm
32342	-	17874	86	19.5	-23.2	YP_239291		5' arm      3' arm
32310	+	17731	85	21	-20.1	YP_239291		5' arm      3' arm
32343	-	19043	85	23.5	-23.4	YP_239291		3' arm
32311	+	17872	90	23	-25.7	YP_239291		5' arm      3' arm
32312	+	21895	87	21	-22.5	YP_239292		5' arm      3' arm
32313	+	22003	88	21.5	-22.6	YP_239292		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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