miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32335	-	3259	90	22	-21.4	YP_239272		5' arm      3' arm
32336	-	3938	77	21	-24	YP_239273		5' arm      3' arm
32337	-	8234	88	19.5	-23.7			5' arm
32338	-	8554	85	19.5	-19.8	YP_239278		5' arm      3' arm
32339	-	8685	90	24	-22.9	YP_239278		3' arm
32340	-	9752	89	24	-19.7	YP_239279		5' arm      3' arm
32341	-	12026	90	25	-24.1	YP_239284		5' arm      3' arm
32342	-	17874	86	19.5	-23.2	YP_239291		5' arm      3' arm
32343	-	19043	85	23.5	-23.4	YP_239291		3' arm
32344	-	21354	89	22	-20.7	YP_239291		5' arm      3' arm
32345	-	21817	90	20.5	-29.4	YP_239292		5' arm      3' arm
32346	-	22194	89	19	-20.7	YP_239292		5' arm      3' arm
32347	-	25619	88	20.5	-19.41	YP_239297		5' arm      3' arm
32348	-	26404	90	19.5	-27			5' arm      3' arm
32349	-	28921	90	22.5	-24.6	YP_239301		5' arm      3' arm
32350	-	31456	86	19.5	-25.4			5' arm      3' arm
32351	-	35061	90	22	-36.42			5' arm      3' arm
32352	-	35586	89	23.5	-23.9	YP_239310
32353	-	40176	86	22.5	-29.1	YP_239314		5' arm      3' arm
32354	-	40728	87	22	-32.6	YP_239315		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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