miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32351	-	35061	90	22	-36.42			5' arm      3' arm
32354	-	40728	87	22	-32.6	YP_239315		5' arm      3' arm
32360	-	51382	85	22	-23.5	YP_239339		5' arm      3' arm
32295	+	260	90	22	-25.8	YP_239269		5' arm      3' arm
32335	-	3259	90	22	-21.4	YP_239272		5' arm      3' arm
32317	+	26543	89	22	-19.9	YP_239298		5' arm      3' arm
32344	-	21354	89	22	-20.7	YP_239291		5' arm      3' arm
32329	+	46327	87	22	-22.1	YP_239324		5' arm      3' arm
32309	+	17095	89	22	-24.6	YP_239289		5' arm      3' arm
32326	+	42621	90	22.5	-22.4	YP_239316		5' arm      3' arm
32353	-	40176	86	22.5	-29.1	YP_239314		5' arm      3' arm
32349	-	28921	90	22.5	-24.6	YP_239301		5' arm      3' arm
32314	+	22712	90	22.5	-21.09	YP_239292		5' arm      3' arm
32316	+	25530	90	22.5	-25.6	YP_239297		5' arm      3' arm
32321	+	33927	86	22.5	-26.5	YP_239308		5' arm      3' arm
32325	+	40375	90	23	-21.5	YP_239315		5' arm      3' arm
32362	-	54866	90	23	-30.1	YP_239350		5' arm      3' arm
32318	+	27914	88	23	-25.6	YP_239300		5' arm      3' arm
32311	+	17872	90	23	-25.7	YP_239291		5' arm      3' arm
32343	-	19043	85	23.5	-23.4	YP_239291		3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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