miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32303	+	8695	90	20.5	-19.6	YP_239278		5' arm      3' arm
32333	-	2603	88	20.5	-19.7	YP_239272		5' arm
32298	+	3855	90	20.5	-24.2	YP_239273		5' arm      3' arm
32345	-	21817	90	20.5	-29.4	YP_239292		5' arm      3' arm
32296	+	1448	89	20.5	-26.6			5' arm      3' arm
32307	+	14055	82	20.5	-19.8	YP_239287		5' arm      3' arm
32306	+	12805	89	20.5	-28.9			5' arm      3' arm
32358	-	47342	85	20.5	-28.9	YP_239326		5' arm      3' arm
32357	-	46415	89	20	-19.7	YP_239324		5' arm      3' arm
32305	+	12660	89	20	-21.6	YP_239285		5' arm      3' arm
32327	+	43035	90	20	-25.9	YP_239316		5' arm      3' arm
32332	-	2353	90	20	-23.3	YP_239272		5' arm      3' arm
32315	+	22886	90	20	-20.7	YP_239292		5' arm      3' arm
32342	-	17874	86	19.5	-23.2	YP_239291		5' arm      3' arm
32338	-	8554	85	19.5	-19.8	YP_239278		5' arm      3' arm
32348	-	26404	90	19.5	-27			5' arm      3' arm
32350	-	31456	86	19.5	-25.4			5' arm      3' arm
32301	+	8166	88	19.5	-25.4			5' arm      3' arm
32334	-	3085	89	19.5	-20	YP_239272		5' arm      3' arm
32320	+	33405	90	19.5	-30.1	YP_239307		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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