miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12566	+	59073	88	20	-28.1	NP_542584		5' arm      3' arm
12567	+	60385	89	22.5	-22.92	NP_542585		5' arm      3' arm
12568	+	62501	88	19	-26.9	NP_542589		5' arm      3' arm
12569	+	63232	88	20	-25	NP_542589		5' arm      3' arm
12570	+	63355	87	20	-19.6	NP_542589		5' arm      3' arm
12571	+	65617	90	22.5	-24.1	NP_542592		5' arm      3' arm
12572	+	66250	86	21	-27.4	NP_542592		5' arm      3' arm
12573	+	67733	84	19.5	-28.8	NP_542593		5' arm      3' arm
12574	+	68768	90	19	-20	NP_542595		5' arm      3' arm
12575	+	69613	90	22	-23.6	NP_542597		5' arm      3' arm
12576	+	70697	88	23	-24.9	NP_542599		5' arm      3' arm
12577	+	71210	87	22.5	-31.4	NP_542600		5' arm      3' arm
12578	+	71874	89	22	-19.4	NP_542601		5' arm      3' arm
12579	+	72357	85	24	-24.9	NP_542601		5' arm      3' arm
12580	+	76839	89	20	-24.9	NP_542608		5' arm      3' arm
12581	-	364	86	19.5	-30.5			5' arm      3' arm
12582	-	870	89	20	-30.7			5' arm      3' arm
12583	-	1093	84	20	-21.9			5' arm      3' arm
12584	-	2431	90	20	-21.4	NP_542495		5' arm      3' arm
12585	-	2559	88	20	-27.1	NP_542495		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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