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| GenBank Identifier | RefSeq Acc. | Name |
| 77864625 | NC_007497.1 | Burkholderia cepacia phage Bcep176 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 33096 | + | 44346 | 90 | 19 | -27.2 | YP_355416 | 5' arm 3' arm | ||
| 33094 | + | 43000 | 87 | 20 | -20.2 | YP_355415 | 5' arm 3' arm | ||
| 33178 | - | 44033 | 90 | 23 | -22.4 | YP_355415 | 5' arm 3' arm | ||
| 33095 | + | 43351 | 90 | 21.5 | -20.6 | YP_355415 | 5' arm 3' arm | ||
| 33177 | - | 42272 | 90 | 19.5 | -20 | YP_355414 | 5' arm 3' arm | ||
| 33092 | + | 41474 | 90 | 19.5 | -24.1 | YP_355414 | 5' arm 3' arm | ||
| 33176 | - | 41720 | 89 | 24.5 | -22.9 | YP_355414 | 5' arm 3' arm | ||
| 33093 | + | 41663 | 79 | 20 | -23.5 | YP_355414 | 5' arm 3' arm | ||
| 33175 | - | 41007 | 87 | 20 | -21.5 | YP_355413 | 5' arm 3' arm | ||
| 33174 | - | 40882 | 89 | 20 | -24.3 | YP_355413 | 5' arm 3' arm | ||
| 33091 | + | 40805 | 88 | 20.5 | -22.6 | YP_355413 | 5' arm 3' arm | ||
| 33090 | + | 40282 | 90 | 24.5 | -21.1 | YP_355412 | 5' arm 3' arm | ||
| 33088 | + | 39857 | 90 | 20 | -27.4 | YP_355412 | 5' arm 3' arm | ||
| 33089 | + | 40097 | 90 | 20 | -24.6 | YP_355412 | 5' arm 3' arm | ||
| 33087 | + | 39641 | 88 | 26.5 | -28.2 | YP_355412 | 5' arm 3' arm | ||
| 33086 | + | 39263 | 87 | 20.5 | -19.8 | YP_355412 | 5' arm 3' arm | ||
| 33085 | + | 38674 | 87 | 23.5 | -21.2 | YP_355410 | 5' arm 3' arm | ||
| 33172 | - | 38560 | 89 | 23.5 | -25.3 | YP_355409 | 5' arm 3' arm | ||
| 33084 | + | 38518 | 90 | 20 | -31.1 | YP_355409 | 5' arm 3' arm | ||
| 33083 | + | 38111 | 90 | 22.5 | -20.1 | YP_355408 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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