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GenBank Identifier | RefSeq Acc. | Name |
12084824 | NC_002641.1 | Meleagrid herpesvirus 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
9866 | + | 1237 | 86 | 20.5 | -26.2 | 5' arm 3' arm | |||
9867 | + | 2210 | 86 | 20.5 | -19.7 | 5' arm 3' arm | |||
9868 | + | 4227 | 82 | 23 | -33.5 | 5' arm 3' arm | |||
9869 | + | 5131 | 89 | 19 | -19.7 | NP_073290 | 5' arm 3' arm | ||
9870 | + | 5696 | 88 | 21.5 | -28.1 | 5' arm 3' arm | |||
9871 | + | 7402 | 90 | 21.5 | -21.5 | NP_073291 | 5' arm 3' arm | ||
9872 | + | 13589 | 85 | 26.5 | -36.4 | NP_073297 | 5' arm 3' arm | ||
9873 | + | 24689 | 90 | 21 | -22.6 | NP_073302 | 5' arm 3' arm | ||
9874 | + | 36828 | 90 | 22 | -27.3 | 5' arm 3' arm | |||
9875 | + | 38479 | 90 | 21 | -22.5 | NP_073312 | 5' arm 3' arm | ||
9876 | + | 60484 | 90 | 20 | -20.6 | NP_073323 | 5' arm 3' arm | ||
9877 | + | 77789 | 89 | 24 | -20.9 | NP_073330 | 5' arm 3' arm | ||
9878 | + | 99114 | 90 | 24 | -35.3 | NP_073341 | 5' arm 3' arm | ||
9879 | + | 103871 | 84 | 21 | -21 | NP_073346 | 5' arm 3' arm | ||
9880 | + | 109319 | 89 | 21 | -28.94 | NP_073349 | 5' arm 3' arm | ||
9881 | + | 117738 | 89 | 24.5 | -27.1 | 5' arm 3' arm | |||
9882 | + | 117907 | 86 | 20.5 | -26.8 | 5' arm 3' arm | |||
9883 | + | 118958 | 88 | 26 | -30.6 | 5' arm 3' arm | |||
9884 | + | 119818 | 86 | 21 | -21.6 | 5' arm 3' arm | |||
9885 | + | 119987 | 90 | 21 | -23.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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