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| GenBank Identifier | RefSeq Acc. | Name |
| 12084824 | NC_002641.1 | Meleagrid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 9902 | + | 132850 | 89 | 21 | -24.9 | NP_073366 | 5' arm 3' arm | ||
| 9973 | - | 155775 | 84 | 23.5 | -22.4 | NP_073366 | 5' arm 3' arm | ||
| 9955 | - | 128212 | 90 | 19.5 | -19.4 | NP_073366 | 5' arm 3' arm | ||
| 9967 | - | 150279 | 90 | 21 | -29 | NP_073366 | 5' arm 3' arm | ||
| 9958 | - | 132938 | 89 | 20 | -23.3 | NP_073366 | 5' arm 3' arm | ||
| 9970 | - | 154050 | 85 | 20.5 | -23.1 | NP_073366 | 5' arm 3' arm | ||
| 9914 | + | 153397 | 85 | 20 | -29 | NP_073366 | 5' arm 3' arm | ||
| 9918 | + | 157507 | 90 | 20.5 | -27.8 | NP_073365 | 5' arm 3' arm | ||
| 9917 | + | 157361 | 89 | 19.5 | -27 | NP_073365 | 5' arm 3' arm | ||
| 9954 | - | 125414 | 88 | 22 | -27.7 | NP_073365 | 5' arm 3' arm | ||
| 9894 | + | 125147 | 89 | 20.5 | -22 | NP_073364 | 5' arm 3' arm | ||
| 9952 | - | 125089 | 90 | 20.5 | -27.8 | NP_073364 | 5' arm 3' arm | ||
| 9921 | - | 1475 | 86 | 25 | -20.1 | NP_073360 | 5' arm 3' arm | ||
| 9922 | - | 1602 | 84 | 25.5 | -36.1 | NP_073360 | 5' arm 3' arm | ||
| 9946 | - | 115227 | 81 | 23 | -21.2 | NP_073355 | 5' arm 3' arm | ||
| 9880 | + | 109319 | 89 | 21 | -28.94 | NP_073349 | 5' arm 3' arm | ||
| 9945 | - | 109181 | 76 | 22 | -23.1 | NP_073349 | 5' arm 3' arm | ||
| 9879 | + | 103871 | 84 | 21 | -21 | NP_073346 | 5' arm 3' arm | ||
| 9943 | - | 102011 | 90 | 19.5 | -20.7 | NP_073343 | 5' arm 3' arm | ||
| 9878 | + | 99114 | 90 | 24 | -35.3 | NP_073341 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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