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| GenBank Identifier | RefSeq Acc. | Name |
| 12084824 | NC_002641.1 | Meleagrid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 9953 | - | 125235 | 89 | 19.5 | -27 | NP_073383 | 5' arm 3' arm | ||
| 9974 | - | 157449 | 89 | 20.5 | -22 | NP_073383 | 5' arm 3' arm | ||
| 9916 | + | 157182 | 88 | 22 | -27.7 | NP_073382 | 5' arm 3' arm | ||
| 9899 | + | 129163 | 83 | 20 | -22 | NP_073381 | 5' arm 3' arm | ||
| 9968 | - | 152130 | 87 | 23 | -21.4 | NP_073381 | 5' arm 3' arm | ||
| 9895 | + | 126821 | 84 | 23.5 | -22.4 | NP_073381 | 5' arm 3' arm | ||
| 9896 | + | 127038 | 90 | 21.5 | -25.5 | NP_073381 | 5' arm 3' arm | ||
| 9897 | + | 128200 | 89 | 21 | -23.8 | NP_073381 | 5' arm 3' arm | ||
| 9898 | + | 128546 | 85 | 20.5 | -23.1 | NP_073381 | 5' arm 3' arm | ||
| 9972 | - | 155558 | 90 | 21.5 | -25.5 | NP_073381 | 5' arm 3' arm | ||
| 9969 | - | 153433 | 83 | 20 | -22 | NP_073381 | 5' arm 3' arm | ||
| 9915 | + | 154384 | 90 | 19.5 | -19.4 | NP_073381 | 5' arm 3' arm | ||
| 9912 | + | 151246 | 85 | 20.5 | -25.2 | NP_073381 | 5' arm 3' arm | ||
| 9911 | + | 149658 | 89 | 20 | -23.3 | NP_073381 | 5' arm 3' arm | ||
| 9957 | - | 131350 | 85 | 20.5 | -25.2 | NP_073381 | 5' arm 3' arm | ||
| 9907 | + | 145832 | 90 | 22 | -32.6 | NP_073369 | 5' arm 3' arm | ||
| 9962 | - | 136764 | 90 | 22 | -32.6 | NP_073369 | 5' arm 3' arm | ||
| 9973 | - | 155775 | 84 | 23.5 | -22.4 | NP_073366 | 5' arm 3' arm | ||
| 9967 | - | 150279 | 90 | 21 | -29 | NP_073366 | 5' arm 3' arm | ||
| 9971 | - | 154396 | 89 | 21 | -23.8 | NP_073366 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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