Results 1 - 20 of 196 are showing below:
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| GenBank Identifier | RefSeq Acc. | Name |
| 18845965 | NC_003409.1 | Human herpesvirus 8 |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 13456 | - | 120434 | 89 | 25 | -19.4 | kshv-mir-K12-7 | 3' arm | ||
| 13457 | - | 120834 | 89 | 20.5 | -29.1 | kshv-mir-K12-6 | 5' arm 3' arm | ||
| 13458 | - | 121341 | 88 | 24.5 | -20.9 | kshv-mir-K12-5 | 3' arm | ||
| 13459 | - | 121489 | 84 | 24.5 | -22.7 | kshv-mir-K12-4 | 5' arm 3' arm | ||
| 13460 | - | 121623 | 89 | 22 | -30.1 | kshv-mir-K12-3 | 5' arm 3' arm | ||
| 13453 | - | 117765 | 86 | 29.5 | -31.6 | kshv-mir-K12-12 | 5' arm | ||
| 13454 | - | 118044 | 86 | 22.5 | -24.5 | NP_572126 | kshv-mir-K12-10a | 3' arm | |
| 13461 | - | 121926 | 88 | 23 | -22.7 | kshv-mir-K12-1 | 5' arm | ||
| 13283 | + | 31086 | 89 | 21.5 | -20.4 | NP_572069 | 5' arm 3' arm | ||
| 13287 | + | 33007 | 90 | 19 | -22.8 | NP_572070 | 5' arm 3' arm | ||
| 13288 | + | 33239 | 90 | 19.5 | -21 | NP_572071 | 5' arm 3' arm | ||
| 13359 | - | 4231 | 89 | 20.5 | -22.8 | NP_572054 | 5' arm 3' arm | ||
| 13289 | + | 33629 | 87 | 23 | -28 | NP_572071 | 5' arm 3' arm | ||
| 13290 | + | 34033 | 87 | 25 | -22 | NP_572071 | 5' arm 3' arm | ||
| 13281 | + | 29923 | 87 | 21 | -20 | 5' arm 3' arm | |||
| 13284 | + | 31202 | 90 | 24 | -21.4 | NP_572069 | 5' arm 3' arm | ||
| 13279 | + | 23628 | 81 | 25 | -36.6 | 5' arm 3' arm | |||
| 13278 | + | 22201 | 86 | 19 | -23.9 | 5' arm 3' arm | |||
| 13277 | + | 18945 | 90 | 21.5 | -25.7 | NP_572062 | 5' arm 3' arm | ||
| 13275 | + | 13853 | 88 | 19.5 | -20.4 | NP_572057 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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