miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13313	+	65054	89	19	-25.4	NP_572097		5' arm      3' arm
13352	+	131688	90	19	-23.2	NP_572132		5' arm      3' arm
13317	+	67743	87	19	-28.2	NP_572098		5' arm      3' arm
13443	-	112182	90	19	-20.7	NP_572121		5' arm      3' arm
13300	+	49012	68	19	-28.2	NP_572080		5' arm      3' arm
13353	+	132342	85	19	-21.2	NP_572132		5' arm      3' arm
13464	-	132997	90	19	-24.1	NP_572132		5' arm      3' arm
13287	+	33007	90	19	-22.8	NP_572070		5' arm      3' arm
13425	-	102645	90	19	-24.2	NP_572119		5' arm      3' arm
13336	+	115877	90	19	-26.9	NP_572124		5' arm      3' arm
13423	-	101167	87	19	-26.34	NP_572118		5' arm      3' arm
13435	-	108622	89	19	-22.2	NP_572120		5' arm      3' arm
13357	+	133795	90	19	-28.3	NP_572132		5' arm      3' arm
13420	-	96605	90	19	-21.9	NP_572115		5' arm      3' arm
13382	-	39635	89	19	-20.4	NP_572075		5' arm      3' arm
13301	+	49097	87	19	-24.1	NP_572080		5' arm      3' arm
13278	+	22201	86	19	-23.9			5' arm      3' arm
13308	+	54619	88	19	-21.2	NP_572086		5' arm      3' arm
13339	+	118768	90	19	-20.7			5' arm      3' arm
13438	-	109635	89	19	-22.1	NP_572120		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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