miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13281	+	29923	87	21	-20			5' arm      3' arm
13283	+	31086	89	21.5	-20.4	NP_572069		5' arm      3' arm
13282	+	30964	88	23	-25.7	NP_572069		5' arm      3' arm
13284	+	31202	90	24	-21.4	NP_572069		5' arm      3' arm
13280	+	23974	89	27.5	-26.9			5' arm      3' arm
13278	+	22201	86	19	-23.9			5' arm      3' arm
13277	+	18945	90	21.5	-25.7	NP_572062		5' arm      3' arm
13287	+	33007	90	19	-22.8	NP_572070		5' arm      3' arm
13294	+	40138	89	22.5	-22.8	NP_572075		5' arm      3' arm
13307	+	54273	83	25.5	-27	NP_572086		5' arm      3' arm
13301	+	49097	87	19	-24.1	NP_572080		5' arm      3' arm
13300	+	49012	68	19	-28.2	NP_572080		5' arm      3' arm
13299	+	47792	88	19.5	-21.9	NP_572078		5' arm      3' arm
13298	+	47570	90	21.5	-30.8	NP_572078		5' arm      3' arm
13302	+	49903	86	22	-24.7	NP_572081		5' arm      3' arm
13296	+	41647	89	19.5	-28	NP_572076		5' arm      3' arm
13297	+	43504	90	20.5	-33.7	NP_572077		5' arm      3' arm
13292	+	37114	89	20	-21.2	NP_572074		5' arm      3' arm
13293	+	38107	87	21.5	-20.7	NP_572074		5' arm      3' arm
13295	+	40556	89	22	-23.8	NP_572076		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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