miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13448	-	115594	88	22.5	-26.6	NP_572124		5' arm      3' arm
13276	+	15396	90	20	-26.4	NP_572058		5' arm      3' arm
13303	+	50924	90	21	-26.4	NP_572083		5' arm      3' arm
13401	-	76556	89	24	-26.4			5' arm      3' arm
13423	-	101167	87	19	-26.34	NP_572118		5' arm      3' arm
13325	+	86643	90	21.5	-26.2	NP_572112		5' arm      3' arm
13342	+	121403	89	29.5	-26.2			5' arm      3' arm
13400	-	75396	88	23	-26.16	NP_572104		5' arm      3' arm
13320	+	76861	90	19.5	-25.8	NP_572105		5' arm      3' arm
13416	-	92796	89	20.5	-25.8	NP_572113		5' arm      3' arm
13417	-	92970	89	20.5	-25.8	NP_572113		5' arm      3' arm
13277	+	18945	90	21.5	-25.7	NP_572062		5' arm      3' arm
13326	+	87685	90	23	-25.7	NP_572112		5' arm      3' arm
13421	-	97878	90	19.5	-25.7	NP_572117		5' arm      3' arm
13282	+	30964	88	23	-25.7	NP_572069		5' arm      3' arm
13389	-	47435	88	20	-25.7	NP_572078		5' arm      3' arm
13415	-	91752	86	21	-25.5			5' arm      3' arm
13313	+	65054	89	19	-25.4	NP_572097		5' arm      3' arm
13324	+	86177	89	23	-25.4	NP_572112		5' arm      3' arm
13311	+	63687	89	23	-25.3	NP_572096		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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