miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13332	+	107598	89	23	-21.1	NP_572120		5' arm      3' arm
13397	-	68437	89	19.5	-21.1	NP_572098		5' arm      3' arm
13386	-	46357	90	19.5	-21.1	NP_572077		5' arm      3' arm
13322	+	80484	88	20.5	-21.1	NP_572109		5' arm      3' arm
13308	+	54619	88	19	-21.2	NP_572086		5' arm      3' arm
13292	+	37114	89	20	-21.2	NP_572074		5' arm      3' arm
13353	+	132342	85	19	-21.2	NP_572132		5' arm      3' arm
13323	+	85255	89	20.5	-21.3			5' arm      3' arm
13383	-	40921	90	21.5	-21.3	NP_572076		5' arm      3' arm
13284	+	31202	90	24	-21.4	NP_572069		5' arm      3' arm
13368	-	16778	90	21.5	-21.4	NP_572059		5' arm      3' arm
13347	+	127521	90	22.5	-21.47			5' arm      3' arm
13463	-	131119	83	20	-21.5	NP_572132		5' arm      3' arm
13363	-	12967	90	20.5	-21.5	NP_572057		5' arm      3' arm
13321	+	78856	89	19.5	-21.6	NP_572108		5' arm      3' arm
13330	+	97859	90	22.5	-21.6	NP_572117		5' arm      3' arm
13429	-	105058	88	22.5	-21.7	NP_572120		5' arm      3' arm
13414	-	90726	89	21.5	-21.7			5' arm      3' arm
13407	-	84272	89	23	-21.7	NP_572111		5' arm      3' arm
13361	-	11699	89	22.5	-21.7	NP_572057		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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