miRNA display CGI


Results 21 - 40 of 196 are showing below:
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GenBank Identifier RefSeq Acc. Name
18845965 NC_003409.1 Human herpesvirus 8

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
13393 - 56144 89 20.5 -20.4 NP_572089 5' arm      3' arm
13275 + 13853 88 19.5 -20.4 NP_572057 5' arm      3' arm
13341 + 121254 88 23 -20.4 5' arm      3' arm
13382 - 39635 89 19 -20.4 NP_572075 5' arm      3' arm
13433 - 108140 88 22 -20.5 NP_572120 5' arm      3' arm
13409 - 85128 84 20.5 -20.6 NP_572111 5' arm      3' arm
13375 - 24309 86 20 -20.7 5' arm      3' arm
13319 + 68349 89 22 -20.7 NP_572098 5' arm      3' arm
13339 + 118768 90 19 -20.7 5' arm      3' arm
13413 - 90513 87 20.5 -20.7 5' arm      3' arm
13443 - 112182 90 19 -20.7 NP_572121 5' arm      3' arm
13286 + 32097 90 19.5 -20.7 NP_572069 5' arm      3' arm
13293 + 38107 87 21.5 -20.7 NP_572074 5' arm      3' arm
13350 + 130888 90 23 -20.8 NP_572132 5' arm      3' arm
13399 - 73647 88 20.5 -20.8 NP_572103 5' arm      3' arm
13452 - 117299 89 22 -20.8 NP_572125 5' arm      3' arm
13370 - 20697 87 19 -20.9 NP_572063 5' arm      3' arm
13458 - 121341 88 24.5 -20.9 kshv-mir-K12-5       3' arm
13288 + 33239 90 19.5 -21 NP_572071 5' arm      3' arm
13322 + 80484 88 20.5 -21.1 NP_572109 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.