miRNA display CGI


Results 41 - 60 of 196 are showing below:
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GenBank Identifier RefSeq Acc. Name
18845965 NC_003409.1 Human herpesvirus 8

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
13439 - 109741 87 21 -23.5 NP_572120 5' arm      3' arm
13455 - 118955 89 22 -23.8 5' arm      3' arm
13468 - 134471 89 21 -24.9 NP_572132 5' arm      3' arm
13432 - 108048 90 21.5 -22.7 NP_572120 5' arm      3' arm
13466 - 133884 90 22 -32.2 NP_572132 5' arm      3' arm
13413 - 90513 87 20.5 -20.7 5' arm      3' arm
13464 - 132997 90 19 -24.1 NP_572132 5' arm      3' arm
13411 - 88053 90 24 -29.7 NP_572112 5' arm      3' arm
13417 - 92970 89 20.5 -25.8 NP_572113 5' arm      3' arm
13423 - 101167 87 19 -26.34 NP_572118 5' arm      3' arm
13427 - 104215 86 20 -22 NP_572120 5' arm      3' arm
13435 - 108622 89 19 -22.2 NP_572120 5' arm      3' arm
13437 - 109256 75 20 -23.6 5' arm      3' arm
13433 - 108140 88 22 -20.5 NP_572120 5' arm      3' arm
13444 - 113474 80 21 -22.3 NP_572122 5' arm      3' arm
13441 - 111343 90 23 -23 NP_572120 5' arm      3' arm
13447 - 115117 89 22 -21.8 NP_572124 5' arm      3' arm
13454 - 118044 86 22.5 -24.5 NP_572126 kshv-mir-K12-10a       3' arm
13460 - 121623 89 22 -30.1 kshv-mir-K12-3 5' arm      3' arm
13456 - 120434 89 25 -19.4 kshv-mir-K12-7       3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.