miRNA display CGI


Results 61 - 80 of 196 are showing below:
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GenBank Identifier RefSeq Acc. Name
18845965 NC_003409.1 Human herpesvirus 8

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
13283 + 31086 89 21.5 -20.4 NP_572069 5' arm      3' arm
13286 + 32097 90 19.5 -20.7 NP_572069 5' arm      3' arm
13378 - 32046 89 21 -25.1 NP_572069 5' arm      3' arm
13284 + 31202 90 24 -21.4 NP_572069 5' arm      3' arm
13287 + 33007 90 19 -22.8 NP_572070 5' arm      3' arm
13290 + 34033 87 25 -22 NP_572071 5' arm      3' arm
13288 + 33239 90 19.5 -21 NP_572071 5' arm      3' arm
13379 - 33800 90 24 -19.7 NP_572071 5' arm      3' arm
13289 + 33629 87 23 -28 NP_572071 5' arm      3' arm
13291 + 35268 88 22 -28.4 NP_572072 5' arm      3' arm
13380 - 35872 88 19.5 -24.7 NP_572073 5' arm      3' arm
13381 - 38033 89 22 -20.2 NP_572074 5' arm      3' arm
13292 + 37114 89 20 -21.2 NP_572074 5' arm      3' arm
13293 + 38107 87 21.5 -20.7 NP_572074 5' arm      3' arm
13382 - 39635 89 19 -20.4 NP_572075 5' arm      3' arm
13294 + 40138 89 22.5 -22.8 NP_572075 5' arm      3' arm
13296 + 41647 89 19.5 -28 NP_572076 5' arm      3' arm
13295 + 40556 89 22 -23.8 NP_572076 5' arm      3' arm
13383 - 40921 90 21.5 -21.3 NP_572076 5' arm      3' arm
13297 + 43504 90 20.5 -33.7 NP_572077 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.