miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13427	-	104215	86	20	-22	NP_572120		5' arm      3' arm
13410	-	85343	87	20	-28.1			5' arm      3' arm
13292	+	37114	89	20	-21.2	NP_572074		5' arm      3' arm
13389	-	47435	88	20	-25.7	NP_572078		5' arm      3' arm
13375	-	24309	86	20	-20.7			5' arm      3' arm
13463	-	131119	83	20	-21.5	NP_572132		5' arm      3' arm
13377	-	26860	86	20.5	-19.9			5' arm      3' arm
13274	+	13503	90	20.5	-30.4	NP_572057		5' arm      3' arm
13416	-	92796	89	20.5	-25.8	NP_572113		5' arm      3' arm
13402	-	77665	88	20.5	-23.7	NP_572106		5' arm      3' arm
13297	+	43504	90	20.5	-33.7	NP_572077		5' arm      3' arm
13409	-	85128	84	20.5	-20.6	NP_572111		5' arm      3' arm
13359	-	4231	89	20.5	-22.8	NP_572054		5' arm      3' arm
13384	-	42850	89	20.5	-25			5' arm      3' arm
13335	+	111924	90	20.5	-24.5	NP_572121		5' arm      3' arm
13399	-	73647	88	20.5	-20.8	NP_572103		5' arm      3' arm
13417	-	92970	89	20.5	-25.8	NP_572113		5' arm      3' arm
13323	+	85255	89	20.5	-21.3			5' arm      3' arm
13436	-	109137	90	20.5	-22.5	NP_572120		5' arm      3' arm
13327	+	88012	87	20.5	-31.1	NP_572112		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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