miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10560	-	279364	90	21.5	-20	NP_077687		5' arm      3' arm
10466	-	61258	89	20	-20	NP_077514		5' arm      3' arm
10398	+	255861	90	21	-20	NP_077669		5' arm      3' arm
10504	-	131521	90	20.5	-20.1	NP_077588		5' arm      3' arm
10419	+	300396	90	19.5	-20.2			5' arm      3' arm
10373	+	213567	89	21.5	-20.2	NP_077649		5' arm      3' arm
10355	+	199307	90	21.5	-20.2	NP_597945		5' arm      3' arm
10285	+	3208	87	19	-20.2	NP_077486		5' arm      3' arm
10449	-	21658	88	19	-20.2	NP_077493		5' arm      3' arm
10389	+	239994	89	24	-20.2	NP_077658		5' arm      3' arm
10368	+	210231	82	25	-20.3	NP_077647		5' arm      3' arm
10537	-	215124	90	20.5	-20.3	NP_077651		5' arm      3' arm
10295	+	25439	89	19	-20.3	NP_077497		5' arm      3' arm
10334	+	115545	87	19.5	-20.3	NP_077572		5' arm      3' arm
10583	-	319910	90	21	-20.3	NP_077663		5' arm      3' arm
10404	+	275420	89	19	-20.4	NP_077684		5' arm      3' arm
10289	+	10576	89	19	-20.4	NP_597942		5' arm      3' arm
10399	+	256783	90	20	-20.5	NP_077670		5' arm      3' arm
10475	-	80445	89	19.5	-20.5	NP_077535		5' arm      3' arm
10427	+	312172	89	20	-20.6			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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