miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10510	-	159489	89	19	-24.5	NP_077614		5' arm      3' arm
10285	+	3208	87	19	-20.2	NP_077486		5' arm      3' arm
10388	+	238912	84	19	-20.8	NP_077657		5' arm      3' arm
10433	+	332092	86	19	-22.1			5' arm      3' arm
10288	+	9980	89	19	-23.6	NP_597942		5' arm      3' arm
10289	+	10576	89	19	-20.4	NP_597942		5' arm      3' arm
10448	-	19334	87	19	-22.7	NP_597944		5' arm      3' arm
10509	-	154410	89	19	-23	NP_077607		5' arm      3' arm
10292	+	17825	90	19	-19.5	NP_077492		5' arm      3' arm
10526	-	198946	90	19	-26	NP_077641		5' arm      3' arm
10546	-	230644	84	19	-21			5' arm      3' arm
10426	+	309643	89	19	-21.6			5' arm      3' arm
10295	+	25439	89	19	-20.3	NP_077497		5' arm      3' arm
10584	-	324005	87	19.5	-31.2			5' arm      3' arm
10396	+	254481	90	19.5	-23.6	NP_077667		5' arm      3' arm
10570	-	297765	88	19.5	-23.5	NP_077695		5' arm      3' arm
10437	-	3141	90	19.5	-21.8	NP_077486		5' arm      3' arm
10574	-	307725	90	19.5	-25.3	NP_597949		5' arm      3' arm
10588	-	324773	87	19.5	-31.2			5' arm      3' arm
10586	-	324389	87	19.5	-31.2			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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