miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10370	+	211343	89	21.5	-30.5	NP_077648		5' arm      3' arm
10358	+	199939	87	24	-30.2			5' arm      3' arm
10305	+	58078	88	24	-29.91	NP_077510		5' arm      3' arm
10565	-	292787	90	20	-29.9			5' arm      3' arm
10431	+	323919	87	20	-29.7			5' arm      3' arm
10387	+	238602	87	21.5	-29.5	NP_077657		5' arm      3' arm
10585	-	324242	90	24	-29.3			5' arm      3' arm
10422	+	302752	90	19.5	-29.3	NP_077698		5' arm      3' arm
10330	+	109125	85	20.5	-29.3	NP_077565		5' arm      3' arm
10532	-	208327	89	20.5	-29	NP_597946		5' arm      3' arm
10435	+	332955	90	21.5	-28.9	NP_077716		5' arm      3' arm
10332	+	111174	90	25	-28.8	NP_077568		5' arm      3' arm
10442	-	11164	89	21.5	-28.8			5' arm      3' arm
10410	+	291596	89	22.5	-28.8			5' arm      3' arm
10467	-	62901	87	20.5	-28.7	NP_077515		5' arm      3' arm
10372	+	212531	88	23	-28.5	NP_077649		5' arm      3' arm
10513	-	167748	89	20.5	-28.2	NP_077624		5' arm      3' arm
10531	-	204504	79	21	-28.2	NP_077645		5' arm      3' arm
10350	+	167659	90	20	-28.1	NP_077624		5' arm      3' arm
10382	+	224562	89	29	-28	NP_597948		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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