miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10586	-	324389	87	19.5	-31.2			5' arm      3' arm
10331	+	109502	90	19.5	-20.77	NP_077566		5' arm      3' arm
10380	+	223638	87	19.5	-23.3	NP_597948		5' arm      3' arm
10411	+	293069	83	19.5	-19.9	NP_077692		5' arm      3' arm
10581	-	318958	80	19.5	-26.3	NP_077663		5' arm      3' arm
10507	-	141959	90	19.5	-19.5	NP_077599		5' arm      3' arm
10422	+	302752	90	19.5	-29.3	NP_077698		5' arm      3' arm
10328	+	100749	86	19.5	-25.4	NP_077556		5' arm      3' arm
10595	-	332203	90	19.5	-22.3			5' arm      3' arm
10405	+	276229	89	19.5	-21.9	NP_077684		5' arm      3' arm
10550	-	231130	72	19.5	-21.7			5' arm      3' arm
10584	-	324005	87	19.5	-31.2			5' arm      3' arm
10419	+	300396	90	19.5	-20.2			5' arm      3' arm
10534	-	208723	89	19.5	-20.7	NP_597946		5' arm      3' arm
10437	-	3141	90	19.5	-21.8	NP_077486		5' arm      3' arm
10396	+	254481	90	19.5	-23.6	NP_077667		5' arm      3' arm
10527	-	200831	89	19.5	-19.6	NP_077642		5' arm      3' arm
10519	-	177733	90	19.5	-24	NP_077632		5' arm      3' arm
10475	-	80445	89	19.5	-20.5	NP_077535		5' arm      3' arm
10590	-	325157	87	19.5	-31.2			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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