miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10290	+	12153	86	21	-25.1			5' arm      3' arm
10287	+	5514	90	20.5	-24	NP_077488		5' arm      3' arm
10285	+	3208	87	19	-20.2	NP_077486		5' arm      3' arm
10286	+	3930	89	20	-24.1	NP_077487		5' arm      3' arm
10283	+	2323	88	20	-20.9	NP_077486		5' arm      3' arm
10297	+	32699	90	23	-27	NP_077502		5' arm      3' arm
10298	+	39968	87	19.5	-22	NP_077506		5' arm      3' arm
10311	+	69544	87	20.5	-23.2	NP_077523		5' arm      3' arm
10310	+	69085	90	22.5	-25.8	NP_077522		5' arm      3' arm
10308	+	64626	88	20	-25.2	NP_077517		5' arm      3' arm
10309	+	66903	89	22.5	-22.4	NP_077519		5' arm      3' arm
10306	+	61645	76	20.5	-27.6	NP_077514		5' arm      3' arm
10307	+	62812	90	23.5	-27.5	NP_077515		5' arm      3' arm
10305	+	58078	88	24	-29.91	NP_077510		5' arm      3' arm
10304	+	53790	90	25	-22.59			5' arm      3' arm
10303	+	53596	90	25	-22.59			5' arm      3' arm
10302	+	45826	88	19.5	-19.4			5' arm      3' arm
10301	+	42880	90	23	-30.8	NP_077508		5' arm      3' arm
10300	+	41373	89	23	-24.8	NP_077507		5' arm      3' arm
10299	+	40346	80	19.5	-26.3	NP_077663		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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