miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31443	+	5247	90	32.5	-22.2			5' arm      3' arm
31452	+	12959	90	19	-22.4			5' arm      3' arm
31436	-	2503	90	23.5	-22.6	YP_184799		5' arm      3' arm
31502	-	24824	90	29	-22.6			5' arm      3' arm
31510	-	14988	90	29	-22.6			5' arm      3' arm
31486	-	6631	87	19	-22.9			5' arm      3' arm
31504	-	27119	90	21.5	-23			5' arm      3' arm
31469	+	12274	89	22.5	-23.2			5' arm      3' arm
31467	+	35	89	22.5	-23.2			5' arm      3' arm
31485	-	753	90	19.5	-23.3			5' arm      3' arm
31496	+	1350	90	28	-23.3			5' arm      3' arm
31451	+	1266	90	24.5	-23.84			5' arm      3' arm
31495	-	10639	89	29.5	-23.9			5' arm      3' arm
31410	-	13030	89	28	-23.9			5' arm      3' arm
31521	-	6814	89	25.5	-23.9			5' arm      3' arm
31461	-	5599	87	26	-24.1			5' arm      3' arm
31426	+	11118	89	25	-24.2	YP_184790		5' arm      3' arm
31518	+	5190	87	24.5	-24.3			5' arm      3' arm
31441	+	3599	79	22	-24.4			5' arm      3' arm
31517	-	10672	90	23.5	-24.5			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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