miRNA display CGI


Results 21 - 40 of 129 are showing below:
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GenBank Identifier RefSeq Acc. Name
57659745 NC_006661.1 Cotesia congregata virus segment Circle35

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31520 + 10946 88 20.5 -28.1 5' arm      3' arm
31474 - 10853 90 21 -21.9 YP_184853 5' arm      3' arm
31511 - 15431 82 21 -32.7 5' arm      3' arm
31527 - 5011 85 21 -29.9 5' arm      3' arm
31478 + 5212 85 21 -29.9 5' arm      3' arm
31448 - 3682 90 21 -27.4 5' arm      3' arm
31513 + 14621 90 21 -20.9 5' arm      3' arm
31506 + 15347 88 21 -20.9 5' arm      3' arm
31487 - 6740 86 21 -26.8 5' arm      3' arm
31405 + 25453 86 21.5 -25.6 5' arm      3' arm
31460 - 932 85 21.5 -28.1 5' arm      3' arm
31483 - 18870 90 21.5 -33.3 5' arm      3' arm
31418 - 6227 90 21.5 -28.6 YP_184775 5' arm      3' arm
31503 - 26336 89 21.5 -28.2 5' arm      3' arm
31504 - 27119 90 21.5 -23 5' arm      3' arm
31508 + 23622 90 21.5 -20.5 YP_184894 5' arm      3' arm
31416 + 26831 88 21.5 -31.3 5' arm      3' arm
31424 + 1434 89 22 -20.8 5' arm      3' arm
31441 + 3599 79 22 -24.4 5' arm      3' arm
31447 - 674 89 22 -29.9 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.