miRNA display CGI


Results 21 - 40 of 129 are showing below:
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GenBank Identifier RefSeq Acc. Name
57753420 NC_006635.1 Cotesia congregata virus segment Circle3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31421 - 26751 88 28.5 -29.2 5' arm      3' arm
31410 - 13030 89 28 -23.9 5' arm      3' arm
31523 - 11136 88 28 -31.1 5' arm      3' arm
31496 + 1350 90 28 -23.3 5' arm      3' arm
31428 + 13190 90 28 -20.3 5' arm      3' arm
31514 - 3419 88 27.5 -21 YP_184900 5' arm      3' arm
31475 - 2934 89 27.5 -21.6 5' arm      3' arm
31439 + 6243 88 27.5 -21 YP_184800 5' arm      3' arm
31519 + 6728 86 27 -29.2 5' arm      3' arm
31529 - 8811 89 27 -27.5 5' arm      3' arm
31476 + 1410 89 27 -27.5 5' arm      3' arm
31462 - 13874 89 27 -30.7 5' arm      3' arm
31432 - 10666 89 27 -30.7 5' arm      3' arm
31434 - 14530 90 27 -31.5 5' arm      3' arm
31482 - 18300 90 26.5 -31 5' arm      3' arm
31481 - 4155 90 26.5 -32.4 5' arm      3' arm
31524 + 6068 90 26.5 -32.4 5' arm      3' arm
31509 + 34142 90 26.5 -25.5 5' arm      3' arm
31457 + 5368 79 26.5 -32.5 5' arm      3' arm
31525 + 10780 87 26 -24.7 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.