miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31444	+	5339	90	35.5	-28.5			5' arm      3' arm
31458	+	31612	87	35	-30.3			5' arm      3' arm
31465	-	31542	89	34.5	-33.1			5' arm      3' arm
31442	+	5156	89	34.5	-33.1			5' arm      3' arm
31404	+	15568	89	33	-25.4			5' arm      3' arm
31408	-	15656	89	33	-25.9			5' arm      3' arm
31464	-	31428	90	32.5	-26			5' arm      3' arm
31454	-	1350	90	32.5	-25.2			5' arm      3' arm
31443	+	5247	90	32.5	-22.2			5' arm      3' arm
31446	-	538	90	31.5	-28.7			5' arm      3' arm
31440	+	449	90	31.5	-29.9			5' arm      3' arm
31466	-	31698	87	31	-27.1			5' arm      3' arm
31453	-	1054	90	31	-32.8			5' arm      3' arm
31450	+	965	90	30.5	-31.5			5' arm      3' arm
31420	-	6758	89	30.5	-36.4			5' arm      3' arm
31495	-	10639	89	29.5	-23.9			5' arm      3' arm
31502	-	24824	90	29	-22.6			5' arm      3' arm
31411	+	6028	89	29	-32.5			5' arm      3' arm
31510	-	14988	90	29	-22.6			5' arm      3' arm
31421	-	26751	88	28.5	-29.2			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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