miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31431	+	22700	90	19.5	-19.8			5' arm      3' arm
31516	-	9482	89	22.5	-19.9			5' arm      3' arm
31428	+	13190	90	28	-20.3			5' arm      3' arm
31508	+	23622	90	21.5	-20.5	YP_184894		5' arm      3' arm
31425	+	5644	90	19.5	-20.5			5' arm      3' arm
31526	-	3768	90	24.5	-20.62			5' arm      3' arm
31479	+	6458	90	24.5	-20.62			5' arm      3' arm
31424	+	1434	89	22	-20.8			5' arm      3' arm
31513	+	14621	90	21	-20.9			5' arm      3' arm
31498	+	25183	88	19.5	-20.9			5' arm      3' arm
31506	+	15347	88	21	-20.9			5' arm      3' arm
31514	-	3419	88	27.5	-21	YP_184900		5' arm      3' arm
31439	+	6243	88	27.5	-21	YP_184800		5' arm      3' arm
31499	+	27030	90	22.5	-21.1			5' arm      3' arm
31427	+	12337	86	22.5	-21.4			5' arm      3' arm
31475	-	2934	89	27.5	-21.6			5' arm      3' arm
31471	-	3416	87	20	-21.7			5' arm      3' arm
31437	+	699	86	22.5	-21.8			5' arm      3' arm
31474	-	10853	90	21	-21.9	YP_184853		5' arm      3' arm
31501	+	28072	89	20.5	-22.1			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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