miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11705	-	137012	89	23	-21.5	NP_258406		5' arm      3' arm
11704	-	127380	87	21	-25.7	NP_258397		5' arm      3' arm
11703	-	120933	85	19	-21.2	NP_258392		5' arm      3' arm
11702	-	110565	89	21	-22.1	NP_258381		5' arm      3' arm
11701	-	103654	90	28.5	-24.9			5' arm      3' arm
11700	-	102007	88	23.5	-21	NP_258372		5' arm      3' arm
11699	-	89603	87	26	-23.2			5' arm      3' arm
11698	-	88008	86	19	-23.4	NP_258358		5' arm      3' arm
11697	-	86048	89	20.5	-21.3	NP_258355		5' arm      3' arm
11696	-	81537	90	24	-32	NP_258353		5' arm      3' arm
11695	-	74857	79	21	-21.4	NP_258347		5' arm      3' arm
11694	-	70724	90	19.5	-24.2	NP_258342		5' arm      3' arm
11693	-	46118	88	20.5	-23.5	NP_258314		5' arm      3' arm
11692	-	42747	90	33	-25.1			5' arm      3' arm
11691	-	41603	84	22	-26.7	NP_258310		5' arm      3' arm
11690	-	41136	89	22	-28.6	NP_258310		5' arm      3' arm
11689	-	29566	89	20.5	-20.7	NP_258297		5' arm      3' arm
11688	-	23238	88	22.5	-24.3	NP_258291		5' arm      3' arm
11687	-	16829	87	20.5	-28.9	NP_258285		5' arm      3' arm
11686	-	15816	86	21.5	-21.3	NP_258284		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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