miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11685	-	15060	89	23	-22	NP_258284		5' arm      3' arm
11684	-	3522	89	25	-25.8			5' arm      3' arm
11683	+	134853	90	22.5	-19.7	NP_258404		5' arm      3' arm
11682	+	132432	89	27	-28.1			5' arm      3' arm
11681	+	131962	90	20.5	-22.5	NP_258403		5' arm      3' arm
11680	+	115060	89	19	-29.7	NP_258386		5' arm      3' arm
11679	+	110496	88	21	-23.9	NP_258381		5' arm      3' arm
11678	+	106035	89	22	-22.9	NP_258375		5' arm      3' arm
11677	+	103125	90	22.5	-20.4	NP_258373		5' arm      3' arm
11676	+	102370	89	22	-19.9	NP_258373		5' arm      3' arm
11675	+	99432	85	20.5	-22	NP_258369		5' arm      3' arm
11674	+	98395	89	22	-23.1	NP_258368		5' arm      3' arm
11673	+	89517	87	25.5	-20			5' arm      3' arm
11672	+	76509	90	23.5	-31.5			5' arm      3' arm
11671	+	74081	87	20	-19.6	NP_258347		5' arm      3' arm
11670	+	72196	90	21	-23.9	NP_258344		5' arm      3' arm
11669	+	63534	90	21.5	-22.6	NP_258336		5' arm      3' arm
11668	+	62267	90	22.5	-21.1	NP_258336		5' arm      3' arm
11667	+	62039	90	23	-20.7	NP_258336		5' arm      3' arm
11666	+	61884	90	22	-22.8	NP_258336		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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