miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11694	-	70724	90	19.5	-24.2	NP_258342		5' arm      3' arm
11669	+	63534	90	21.5	-22.6	NP_258336		5' arm      3' arm
11666	+	61884	90	22	-22.8	NP_258336		5' arm      3' arm
11668	+	62267	90	22.5	-21.1	NP_258336		5' arm      3' arm
11667	+	62039	90	23	-20.7	NP_258336		5' arm      3' arm
11665	+	50652	89	19	-25.2	NP_258323		5' arm      3' arm
11693	-	46118	88	20.5	-23.5	NP_258314		5' arm      3' arm
11664	+	46070	90	19.5	-27.2	NP_258314		5' arm      3' arm
11691	-	41603	84	22	-26.7	NP_258310		5' arm      3' arm
11662	+	41996	87	20.5	-23.6	NP_258310		5' arm      3' arm
11663	+	42117	88	20.5	-21.7	NP_258310		5' arm      3' arm
11690	-	41136	89	22	-28.6	NP_258310		5' arm      3' arm
11661	+	34877	89	24	-23.5	NP_258304		5' arm      3' arm
11659	+	32426	89	26.5	-26.7	NP_258301		5' arm      3' arm
11660	+	33110	88	23.5	-28	NP_258301		5' arm      3' arm
11658	+	31682	83	19.5	-21.5	NP_258300		5' arm      3' arm
11689	-	29566	89	20.5	-20.7	NP_258297		5' arm      3' arm
11657	+	26559	89	20.5	-28.8	NP_258293		5' arm      3' arm
11688	-	23238	88	22.5	-24.3	NP_258291		5' arm      3' arm
11653	+	19933	84	19	-21.6	NP_258289		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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