miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
152	-	33323	85	19.5	-20.1	AP_000159		5' arm      3' arm
150	-	32495	87	20	-23	AP_000158		5' arm      3' arm
151	-	32933	87	21.5	-26.3	AP_000158		5' arm      3' arm
115	+	31054	81	20	-21.4	AP_000157		5' arm      3' arm
149	-	30607	90	20	-25.8	AP_000155		5' arm      3' arm
114	+	29510	88	20	-24	AP_000153		5' arm      3' arm
138	-	17698	88	21.5	-29.7	AP_000149		5' arm      3' arm
105	+	17413	90	21	-27	AP_000149		5' arm      3' arm
104	+	17324	88	21.5	-29.5	AP_000149		5' arm      3' arm
137	-	17595	81	21	-23.1	AP_000149		5' arm      3' arm
136	-	16819	89	20.5	-22.4	AP_000148		5' arm      3' arm
102	+	14209	89	19.5	-23.4	AP_000147		5' arm      3' arm
131	-	14968	87	22	-21	AP_000147		5' arm      3' arm
101	+	13545	88	19.5	-24.6	AP_000147		5' arm      3' arm
129	-	12526	88	20	-25.3	AP_000146		5' arm      3' arm
99	+	11922	85	20.5	-21.06	AP_000146		5' arm      3' arm
126	-	11877	90	21	-27.9	AP_000146		5' arm      3' arm
100	+	13090	89	24	-25.2	AP_000146		5' arm      3' arm
130	-	12976	90	21.5	-23.2	AP_000146		5' arm      3' arm
128	-	12261	90	22.5	-21.6	AP_000146		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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