miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29306	-	81569	88	19	-29.7	YP_068184		5' arm      3' arm
29244	+	169514	88	19	-23.5	YP_068253		5' arm      3' arm
29192	+	109252	88	19	-26.2	YP_068203		5' arm      3' arm
29216	+	126759	87	19	-23.8	YP_068219		5' arm      3' arm
29174	+	87252	87	19	-24.7			5' arm      3' arm
29217	+	127449	89	19	-20.6	YP_068220		5' arm      3' arm
29227	+	142305	90	19	-26.4	YP_068233		5' arm      3' arm
29283	-	36641	87	19	-25.7	YP_068140		5' arm      3' arm
29320	-	123684	74	19	-32			5' arm      3' arm
29214	+	125773	79	19	-23.7	YP_068219		5' arm      3' arm
29284	-	36909	90	19	-21.8	YP_068140		5' arm      3' arm
29210	+	123627	90	19	-22.4			5' arm      3' arm
29325	-	147821	87	19	-25			5' arm      3' arm
29186	+	101615	88	19	-20	YP_068198		5' arm      3' arm
29278	-	31665	88	19	-22.6	YP_068134		5' arm      3' arm
29166	+	23336	86	19	-21.4	YP_068124		5' arm      3' arm
29274	-	8822	88	19	-21.3	YP_068104		5' arm      3' arm
29329	-	152519	83	19	-20.8	YP_068240		5' arm      3' arm
29319	-	118923	84	19	-19.9	YP_068211		5' arm      3' arm
29328	-	150156	88	19	-19.7	YP_068236		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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