miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11408	+	1549	89	21.5	-29.8	NP_203417		5' arm      3' arm
11417	+	4809	86	22	-21.8			5' arm      3' arm
11412	+	2792	90	22	-26.7	NP_203420		5' arm      3' arm
11404	+	760	87	22	-30.8	NP_203415		5' arm      3' arm
11403	+	513	86	22	-23	NP_203415		5' arm      3' arm
11415	+	3787	90	19	-21.5	NP_203422		5' arm      3' arm
11422	+	8530	90	21.5	-24.6	NP_203431		5' arm      3' arm
11430	+	11088	88	20	-22.4	NP_203434		5' arm      3' arm
11428	+	10687	90	20	-21.5	NP_203434		5' arm      3' arm
11427	+	9937	87	20.5	-21.3	NP_203433		5' arm      3' arm
11435	+	13119	84	21.5	-20.4	NP_203439		5' arm      3' arm
11429	+	10942	90	21.5	-22.9	NP_203434		5' arm      3' arm
11431	+	11479	90	22.5	-24.1	NP_203435		5' arm      3' arm
11425	+	9328	90	19.5	-32.4	NP_203433		5' arm      3' arm
11424	+	9051	89	19.5	-20.4	NP_203432		5' arm      3' arm
11421	+	8356	90	19.5	-22.3	NP_203430		5' arm      3' arm
11423	+	8815	90	20	-25.1	NP_203431		5' arm      3' arm
11418	+	5658	90	20	-26.8	NP_203426		5' arm      3' arm
11420	+	8254	78	20.5	-31			5' arm      3' arm
11419	+	6416	90	21	-31.2	NP_203426		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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