miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11531	-	8944	85	19.5	-26.4	NP_203432		5' arm      3' arm
11595	-	36811	90	19.5	-19.5			5' arm      3' arm
11598	-	38020	89	19.5	-23.2	NP_203479		5' arm      3' arm
11505	+	43917	88	19.5	-24.7	NP_203489		5' arm      3' arm
11536	-	11285	89	19.5	-22.7	NP_203435		5' arm      3' arm
11425	+	9328	90	19.5	-32.4	NP_203433		5' arm      3' arm
11424	+	9051	89	19.5	-20.4	NP_203432		5' arm      3' arm
11421	+	8356	90	19.5	-22.3	NP_203430		5' arm      3' arm
11543	-	14624	88	19.5	-21.9			5' arm      3' arm
11611	-	42784	90	19.5	-25.9	NP_203489		5' arm      3' arm
11405	+	882	90	19.5	-20.7	NP_203415		5' arm      3' arm
11416	+	4533	89	19.5	-20			5' arm      3' arm
11432	+	11744	90	19.5	-20.6	NP_203436		5' arm      3' arm
11413	+	3506	84	19.5	-23.1	NP_203421		5' arm      3' arm
11459	+	24553	88	19.5	-23.8	NP_203462		5' arm      3' arm
11527	-	7166	89	19.5	-26	NP_203428		5' arm      3' arm
11472	+	29369	89	19.5	-22.2	NP_203468		5' arm      3' arm
11474	+	30317	87	19.5	-21.5	NP_203470		5' arm      3' arm
11462	+	25367	82	20	-23.5	NP_203463		5' arm      3' arm
11433	+	12360	88	20	-20.2	NP_203437		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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