miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11409	+	1796	76	21.5	-23	NP_203418		5' arm      3' arm
11571	-	26366	90	21.5	-22.8	NP_203465		5' arm      3' arm
11460	+	24651	87	21.5	-20.5	NP_203462		5' arm      3' arm
11461	+	25137	90	21.5	-26.5	NP_203463		5' arm      3' arm
11575	-	27951	90	21.5	-21	NP_203466		5' arm      3' arm
11508	+	47735	90	21.5	-28.7	NP_203496		5' arm      3' arm
11455	+	21664	89	21.5	-23.4	NP_203459		5' arm      3' arm
11454	+	21555	90	21.5	-23.8	NP_203459		5' arm      3' arm
11435	+	13119	84	21.5	-20.4	NP_203439		5' arm      3' arm
11429	+	10942	90	21.5	-22.9	NP_203434		5' arm      3' arm
11486	+	35420	90	21.5	-25.9			5' arm      3' arm
11492	+	38313	89	21.5	-27.7	NP_203480		5' arm      3' arm
11560	-	21377	90	21.5	-22	NP_203459		5' arm      3' arm
11564	-	24621	88	21.5	-22.6	NP_203462		5' arm      3' arm
11499	+	40479	89	21.5	-23.4	NP_203484		5' arm      3' arm
11422	+	8530	90	21.5	-24.6	NP_203431		5' arm      3' arm
11556	-	19880	88	21.5	-19.4	NP_203458		5' arm      3' arm
11592	-	35140	89	21.5	-24.6			5' arm      3' arm
11477	+	32579	87	21.5	-24.3	NP_203471		5' arm      3' arm
11491	+	37853	89	21.5	-20.9	NP_203479		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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