miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24479	+	113713	89	20	-20.6			5' arm      3' arm
24397	+	47685	90	23	-24.4			5' arm      3' arm
24433	+	69415	90	22.5	-27.32			5' arm      3' arm
24380	+	37942	90	24.5	-24.2			5' arm      3' arm
24351	+	18894	87	21.5	-27.7			5' arm      3' arm
24346	+	16358	90	21.5	-19.8			5' arm      3' arm
24350	+	17663	83	21	-21.2			5' arm      3' arm
24356	+	22494	90	20.5	-29.3			5' arm      3' arm
24363	+	26622	86	19	-21.9			5' arm      3' arm
24407	+	54370	88	20.5	-24.1			5' arm      3' arm
24472	+	105461	90	20	-21.5			5' arm      3' arm
24338	+	5233	90	20.5	-32.6			5' arm      3' arm
24332	+	1515	90	22.5	-25.5			5' arm      3' arm
24489	+	119917	90	25	-34.2			5' arm      3' arm
24333	+	1727	87	21.5	-24.6			5' arm      3' arm
24482	+	114813	86	19.5	-25.1			5' arm      3' arm
24331	+	781	87	19.5	-25.9			5' arm      3' arm
24438	+	76564	85	20	-27.1			5' arm      3' arm
24383	+	41092	79	21.5	-35.2			5' arm      3' arm
24352	+	19192	90	22.5	-21.2			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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