miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13588	-	36998	90	20	-21.4	NP_599085		5' arm      3' arm
13587	-	36755	88	25	-25.8	NP_599085		5' arm      3' arm
13570	+	36385	88	19	-20.9	NP_599084		5' arm      3' arm
13569	+	36153	85	19.5	-25	NP_599083		5' arm      3' arm
13566	+	31968	89	21.5	-25.1	NP_599077		5' arm      3' arm
13565	+	31854	90	23	-32.7	NP_599077		5' arm      3' arm
13567	+	32417	90	19	-19.65	NP_599077		5' arm      3' arm
13563	+	28362	90	22.5	-22.5	NP_599071		5' arm      3' arm
13585	-	28451	90	20.5	-21.7	NP_599071		5' arm      3' arm
13562	+	27567	89	21	-28.2	NP_599069		5' arm      3' arm
13561	+	27143	87	19	-25.7	NP_599068		5' arm      3' arm
13559	+	16762	90	20	-23.1	NP_599053		5' arm      3' arm
13558	+	16447	85	19.5	-20.81	NP_599052		5' arm      3' arm
13557	+	16280	90	19	-23	NP_599052		5' arm      3' arm
13555	+	15454	89	24.5	-21.6	NP_599051		5' arm      3' arm
13554	+	15296	89	22	-22.7	NP_599051		5' arm      3' arm
13556	+	15775	90	19.5	-26	NP_599051		5' arm      3' arm
13583	-	14721	89	19	-23.2	NP_599050		5' arm      3' arm
13582	-	14181	87	19	-24.6	NP_599049		5' arm      3' arm
13553	+	14250	90	22.5	-19.6	NP_599049		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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