miRNA display CGI


Results 21 - 40 of 119 are showing below:
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GenBank Identifier RefSeq Acc. Name
58042841 NC_005137.2 Choristoneura fumiferana defective nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22907 + 110700 90 22.5 -20.6 NP_932739 5' arm      3' arm
22892 + 85541 90 22.5 -24.6 NP_932708 5' arm      3' arm
22914 + 129165 86 22.5 -19.8 NP_932757 5' arm      3' arm
22939 - 52636 89 22.5 -23.5 NP_932671 5' arm      3' arm
22933 - 36596 90 22.5 -26.7 NP_932655 5' arm      3' arm
22924 - 26736 90 22.5 -31.6 NP_932642 5' arm      3' arm
22968 - 119776 87 22.5 -21 NP_932748 5' arm      3' arm
22876 + 49722 85 22.5 -23.3 NP_932670 5' arm      3' arm
22879 + 57494 81 22.5 -20.9 NP_932675 5' arm      3' arm
22929 - 33075 88 22.5 -22.1 NP_932651 5' arm      3' arm
22937 - 46548 88 22.5 -25.2 NP_932667 5' arm      3' arm
22928 - 32663 90 22 -26.7 NP_932651 5' arm      3' arm
22890 + 80258 89 22 -24.1 NP_932703 5' arm      3' arm
22950 - 81834 81 22 -29.1 NP_932705 5' arm      3' arm
22913 + 126954 90 22 -30.2 5' arm      3' arm
22920 - 16634 90 22 -22.2 NP_932630 5' arm      3' arm
22934 - 41365 89 22 -20.29 NP_932658 5' arm      3' arm
22869 + 32234 88 22 -31 NP_932651 5' arm      3' arm
22896 + 95930 89 21.5 -37.3 NP_932723 5' arm      3' arm
22882 + 63696 88 21.5 -25 NP_932687 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.