miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12119	3'	-57.8	NC_003309.1	+	44405	0.66	0.574235
	Target:  5'- cGAGCgccucggggaagUUGCaaagugGGCGCCGuCGAACGACu -3' miRNA:   3'- -CUCG------------AACGgg----CUGCGGC-GCUUGCUGu -5'
12119	3'	-57.8	NC_003309.1	+	45005	0.69	0.412663
	Target:  5'- -cGCUUGCgUGAuggaaaucCGCCGCGGACaaGGCAa -3' miRNA:   3'- cuCGAACGgGCU--------GCGGCGCUUG--CUGU- -5'
12119	3'	-57.8	NC_003309.1	+	45667	0.69	0.385538
	Target:  5'- --cCUUGCCCGACGCCcCGua-GACGu -3' miRNA:   3'- cucGAACGGGCUGCGGcGCuugCUGU- -5'
12119	3'	-57.8	NC_003309.1	+	46287	0.67	0.500578
	Target:  5'- cGAGCgcgcgUGCCCuuccuUGCCGUcAGCGGCAu -3' miRNA:   3'- -CUCGa----ACGGGcu---GCGGCGcUUGCUGU- -5'
12119	3'	-57.8	NC_003309.1	+	47502	0.67	0.490378
	Target:  5'- cAGCUU-CUCGAgGCgGCGcAGCGACAc -3' miRNA:   3'- cUCGAAcGGGCUgCGgCGC-UUGCUGU- -5'
12119	3'	-57.8	NC_003309.1	+	48225	0.66	0.552851
	Target:  5'- cGAGCc-GUCCGAgCGCCGCuGACGcGCGa -3' miRNA:   3'- -CUCGaaCGGGCU-GCGGCGcUUGC-UGU- -5'
12119	3'	-57.8	NC_003309.1	+	52445	0.66	0.531711
	Target:  5'- -cGCUgUGCUCGAUGCUgaacugGCGGGCGAUc -3' miRNA:   3'- cuCGA-ACGGGCUGCGG------CGCUUGCUGu -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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