miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12375	5'	-53	NC_003324.1	+	55838	0.7	0.673231
	Target:  5'- uUUCCGCCACCGaUCGuauccggauccuguaUCcGAGAACGUg -3' miRNA:   3'- gGAGGCGGUGGC-AGC---------------AG-UUCUUGUAg -5'
12375	5'	-53	NC_003324.1	+	1194	0.7	0.65783
	Target:  5'- -aUCCgGCCGCgauccgaaCGUCGUCAAGAAaAUCg -3' miRNA:   3'- ggAGG-CGGUG--------GCAGCAGUUCUUgUAG- -5'
12375	5'	-53	NC_003324.1	+	2613	0.7	0.613666
	Target:  5'- gCCgUCCGUCGCCuguUCGUCGGuGGCGUCa -3' miRNA:   3'- -GG-AGGCGGUGGc--AGCAGUUcUUGUAG- -5'
12375	5'	-53	NC_003324.1	+	40166	0.71	0.602641
	Target:  5'- -gUCCGaCACCuUCGaCAGGAACAUCa -3' miRNA:   3'- ggAGGCgGUGGcAGCaGUUCUUGUAG- -5'
12375	5'	-53	NC_003324.1	+	48906	0.72	0.50556
	Target:  5'- aCUCCGCCACCcgccacaagaucGUCGaccuggUCAAGGcCGUCg -3' miRNA:   3'- gGAGGCGGUGG------------CAGC------AGUUCUuGUAG- -5'
12375	5'	-53	NC_003324.1	+	35160	0.72	0.50556
	Target:  5'- aCCUUCGgCGCCGUCGUCuuccAGucccuCGUCa -3' miRNA:   3'- -GGAGGCgGUGGCAGCAGu---UCuu---GUAG- -5'
12375	5'	-53	NC_003324.1	+	34820	1.13	0.001072
	Target:  5'- aCCUCCGCCACCGUCGUCAAGAACAUCg -3' miRNA:   3'- -GGAGGCGGUGGCAGCAGUUCUUGUAG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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