miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12446	3'	-53.6	NC_003324.1	+	20803	0.66	0.745519
	Target:  5'- --aGGCGGCGgaccGUGUUGGUGACGcgCAu -3' miRNA:   3'- uagCUGCCGU----UACAGCCGCUGUa-GUu -5'
12446	3'	-53.6	NC_003324.1	+	1528	0.66	0.766623
	Target:  5'- -cCGGCGGCAGUGgugcgCGGCGcUAUg-- -3' miRNA:   3'- uaGCUGCCGUUACa----GCCGCuGUAguu -5'
12446	3'	-53.6	NC_003324.1	+	43147	0.66	0.766623
	Target:  5'- cUCGACGGCGAgcuUGUUGaGCGAgCGcCAAu -3' miRNA:   3'- uAGCUGCCGUU---ACAGC-CGCU-GUaGUU- -5'
12446	3'	-53.6	NC_003324.1	+	53059	0.66	0.776963
	Target:  5'- cAUUGGCGGCAggucgcgcucGUcUCGGCG-CGUCAc -3' miRNA:   3'- -UAGCUGCCGU----------UAcAGCCGCuGUAGUu -5'
12446	3'	-53.6	NC_003324.1	+	36405	0.66	0.776963
	Target:  5'- -aCGAUGGCGcgGUgGaaGACAUCAAc -3' miRNA:   3'- uaGCUGCCGUuaCAgCcgCUGUAGUU- -5'
12446	3'	-53.6	NC_003324.1	+	2498	0.66	0.791172
	Target:  5'- cGUCGGCGGCuucaucaucggcGUUGGCGGuguCAUCAu -3' miRNA:   3'- -UAGCUGCCGuua---------CAGCCGCU---GUAGUu -5'
12446	3'	-53.6	NC_003324.1	+	15955	0.66	0.797159
	Target:  5'- aAUCGACaaGGCGGgggcGUUGGCGACGa--- -3' miRNA:   3'- -UAGCUG--CCGUUa---CAGCCGCUGUaguu -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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