miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
16692	5'	-49	NC_004156.1	+	2223	0.72	0.967582
	Target:  5'- cAUUGGACAUGGAUGUauuagaugAUGCAUUCGa -3' miRNA:   3'- aUAGUUUGUGCCUACG--------UACGUGAGCc -5'
16692	5'	-49	NC_004156.1	+	96434	0.72	0.967582
	Target:  5'- gAUUGGACACacuGGGUGCAcugggUGCACUgGGg -3' miRNA:   3'- aUAGUUUGUG---CCUACGU-----ACGUGAgCC- -5'
16692	5'	-49	NC_004156.1	+	203365	0.73	0.953033
	Target:  5'- aAUCuugcAGCACGGAUGCcgaaccUGUACUUGGu -3' miRNA:   3'- aUAGu---UUGUGCCUACGu-----ACGUGAGCC- -5'
16692	5'	-49	NC_004156.1	+	166086	0.73	0.952621
	Target:  5'- gAUCGA-CACGGAcaacgGCguccgucugaguuGUGCACUCGGa -3' miRNA:   3'- aUAGUUuGUGCCUa----CG-------------UACGUGAGCC- -5'
16692	5'	-49	NC_004156.1	+	85318	0.77	0.829823
	Target:  5'- cGUCuuuGACugGGGUGCGuuaaagaUGCACUUGGc -3' miRNA:   3'- aUAGu--UUGugCCUACGU-------ACGUGAGCC- -5'
16692	5'	-49	NC_004156.1	+	138370	0.81	0.622425
	Target:  5'- cAUCAAACGCGGcGUGCAcaUGCuCUCGGu -3' miRNA:   3'- aUAGUUUGUGCC-UACGU--ACGuGAGCC- -5'
16692	5'	-49	NC_004156.1	+	212104	0.66	0.999693
	Target:  5'- --cCGGAUACGGucUGCAcuUGCACaCGGu -3' miRNA:   3'- auaGUUUGUGCCu-ACGU--ACGUGaGCC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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