Results 21 - 40 of 117 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 45117 | 0.75 | 0.958361 |
Target: 5'- -uGUucGUAUAUAGCUUAGGUGUUAu -3' miRNA: 3'- cuCAccCAUAUAUCGAAUCCACAAUu -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 52367 | 0.75 | 0.949818 |
Target: 5'- -----uGUAUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cucaccCAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 25156 | 0.77 | 0.89761 |
Target: 5'- aAGUGaGUAUAUAGCUUAGGgGUUAAa -3' miRNA: 3'- cUCACcCAUAUAUCGAAUCCaCAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 54373 | 0.8 | 0.795097 |
Target: 5'- -uGUGuaUGUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cuCACccAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 13226 | 0.7 | 0.997035 |
Target: 5'- ------aUAUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cucacccAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 104201 | 0.74 | 0.977881 |
Target: 5'- --uUGuuUAUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cucACccAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 162627 | 0.75 | 0.945138 |
Target: 5'- -uGUuuGUAUAUAGCUUGGGUGUUAAc -3' miRNA: 3'- cuCAccCAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 74806 | 0.87 | 0.442442 |
Target: 5'- uGAGUGuaUAUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- -CUCACccAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 58257 | 0.74 | 0.977881 |
Target: 5'- cGAGUGaGUAUAUAGCUUcaGUGUUAAa -3' miRNA: 3'- -CUCACcCAUAUAUCGAAucCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 114433 | 0.87 | 0.422988 |
Target: 5'- aAGUGaGUAUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cUCACcCAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 3478 | 0.75 | 0.949818 |
Target: 5'- -----uGUAUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cucaccCAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 136262 | 0.74 | 0.968888 |
Target: 5'- uGAGUaGGUAuagcaaacaaauaUAUAGUUUAGGUGUUGAg -3' miRNA: 3'- -CUCAcCCAU-------------AUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 167183 | 0.77 | 0.911177 |
Target: 5'- ---aGcGUAUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cucaCcCAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 29484 | 0.77 | 0.904532 |
Target: 5'- uAGUGaGUAaauaUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cUCACcCAU----AUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 67742 | 0.78 | 0.859011 |
Target: 5'- cGAGUGaGUAUAUAGCUUAaGUGUUAAa -3' miRNA: 3'- -CUCACcCAUAUAUCGAAUcCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 48604 | 0.8 | 0.804834 |
Target: 5'- uGAGUGaaUAUAUAGUUUAGGUGUUAAa -3' miRNA: 3'- -CUCACccAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 156829 | 0.7 | 0.997035 |
Target: 5'- ------aUAUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cucacccAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 16919 | 0.7 | 0.997035 |
Target: 5'- ------aUAUAUAGCUUAGGUGUUAAa -3' miRNA: 3'- cucacccAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 169572 | 0.72 | 0.988129 |
Target: 5'- --aUGcGaGUGUAUAGUUUAGGUGUUAAa -3' miRNA: 3'- cucAC-C-CAUAUAUCGAAUCCACAAUU- -5' |
|||||||
28284 | 5' | -45.8 | NC_005902.1 | + | 67388 | 0.73 | 0.980324 |
Target: 5'- aAGUGuGUAUAUAGCUUAaGUGUUAAa -3' miRNA: 3'- cUCACcCAUAUAUCGAAUcCACAAUU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home