Results 21 - 40 of 98 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 19506 | 1.1 | 0.003379 |
Target: 5'- uUUGUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- -AGCAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 19616 | 1.1 | 0.003379 |
Target: 5'- uUUGUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- -AGCAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 20070 | 1.09 | 0.003694 |
Target: 5'- uUUGUCGAGGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- -AGCAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 19661 | 1.09 | 0.003694 |
Target: 5'- uUUGUCGAGGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- -AGCAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 8956 | 1.09 | 0.004039 |
Target: 5'- cUGUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- aGCAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 17083 | 1.06 | 0.006307 |
Target: 5'- uUUGUUGAAGCUAGCUUGGCCCAAGCCa -3' miRNA: 3'- -AGCAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 17523 | 1.05 | 0.007537 |
Target: 5'- uUUGUCGAAGCUAGCUUGGUCCAAGCCg -3' miRNA: 3'- -AGCAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 17653 | 1.05 | 0.007537 |
Target: 5'- uUUGUCGAAGCUAGCUUGGUCCAAGCCg -3' miRNA: 3'- -AGCAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 9067 | 1.04 | 0.008239 |
Target: 5'- uUUGUCGAAGCUAGCUUGGCUCAAGCCg -3' miRNA: 3'- -AGCAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 21989 | 1.04 | 0.008239 |
Target: 5'- cUCGUCGAAGCUAACUUGGCCCAaaccGGCCu -3' miRNA: 3'- -AGCAGCUUCGAUUGAACCGGGU----UCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 17128 | 1.02 | 0.011415 |
Target: 5'- uUUGUCGAAGCUAACUcGGCCCAAGCCg -3' miRNA: 3'- -AGCAGCUUCGAUUGAaCCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 11736 | 1.02 | 0.012112 |
Target: 5'- --aUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- agcAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 11347 | 1.02 | 0.012112 |
Target: 5'- --aUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- agcAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 11217 | 1.02 | 0.012112 |
Target: 5'- --aUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- agcAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 11282 | 1.02 | 0.012112 |
Target: 5'- --aUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- agcAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 11931 | 1.02 | 0.012112 |
Target: 5'- --aUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- agcAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 11412 | 1.02 | 0.012112 |
Target: 5'- --aUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- agcAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 11866 | 1.02 | 0.012112 |
Target: 5'- --aUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- agcAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 11542 | 1.02 | 0.012112 |
Target: 5'- --aUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- agcAGCUUCGAUUGAACCGGGUUCGG- -5' |
|||||||
28326 | 5' | -51.7 | NC_005905.1 | + | 11671 | 1.02 | 0.012112 |
Target: 5'- --aUCGAAGCUAGCUUGGCCCAAGCCg -3' miRNA: 3'- agcAGCUUCGAUUGAACCGGGUUCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home