Results 1 - 20 of 87 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 31858 | 1.1 | 0.001041 |
Target: 5'- cUCUGGGUCCACGCUUCCGCCCCUGGGa -3' miRNA: 3'- -AGACCCAGGUGCGAAGGCGGGGACCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 136133 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 136319 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 136412 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 136226 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 136505 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 136598 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 136691 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 136783 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 136040 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 135947 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 135854 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 44867 | 0.77 | 0.212121 |
Target: 5'- --cGGGUCCcCGCUgagaaGCCCCUGGGc -3' miRNA: 3'- agaCCCAGGuGCGAagg--CGGGGACCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 135204 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 135297 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 135390 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 135483 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 135576 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 135669 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
|||||||
28876 | 3' | -61.1 | NC_006146.1 | + | 135761 | 0.77 | 0.212121 |
Target: 5'- cCUGGGUCCGCuGCc-CCGCUCCggcgGGGg -3' miRNA: 3'- aGACCCAGGUG-CGaaGGCGGGGa---CCC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home