miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
30688	5'	-59.2	NC_006552.1	+	17299	0.73	0.21565
	Target:  5'- cGGCCGCGugGCGGUGAguACCUggUCGUcgaagugaacGGCAa -3' miRNA:   3'- -CCGGCGU--UGCCACU--UGGG--AGCG----------CCGU- -5'
30688	5'	-59.2	NC_006552.1	+	7689	0.69	0.39225
	Target:  5'- gGGCCGCc-CGGUGAA----CGCGGCAa -3' miRNA:   3'- -CCGGCGuuGCCACUUgggaGCGCCGU- -5'
30688	5'	-59.2	NC_006552.1	+	5129	0.66	0.555769
	Target:  5'- aGGCCuGCGGCGGUcGGGCCaCUCuccaGCaGCu -3' miRNA:   3'- -CCGG-CGUUGCCA-CUUGG-GAG----CGcCGu -5'
30688	5'	-59.2	NC_006552.1	+	3207	0.67	0.51488
	Target:  5'- uGCaGCAGCGaGgccGAACUCUgCGCGGCGu -3' miRNA:   3'- cCGgCGUUGC-Ca--CUUGGGA-GCGCCGU- -5'
30688	5'	-59.2	NC_006552.1	+	2818	0.66	0.57553
	Target:  5'- uGGaCCGCAACuGUucgacugGAACCC-CGCGGa- -3' miRNA:   3'- -CC-GGCGUUGcCA-------CUUGGGaGCGCCgu -5'
30688	5'	-59.2	NC_006552.1	+	2091	0.66	0.534165
	Target:  5'- uGCCGUgcGAUGGUGGaguugAUCCUCaucgagcGCGGCGa -3' miRNA:   3'- cCGGCG--UUGCCACU-----UGGGAG-------CGCCGU- -5'
30688	5'	-59.2	NC_006552.1	+	1985	1.09	0.000506
	Target:  5'- uGGCCGCAACGGUGAACCCUCGCGGCAc -3' miRNA:   3'- -CCGGCGUUGCCACUUGGGAGCGCCGU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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