miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
30697	3'	-55.6	NC_006552.1	+	27548	0.69	0.586673
	Target:  5'- cGCUCucuGCCuCCGCuuCUGCUGCCGGc-- -3' miRNA:   3'- -CGAG---UGG-GGUGugGAUGGCGGCUuug -5'
30697	3'	-55.6	NC_006552.1	+	18666	0.69	0.575915
	Target:  5'- cUUCAgCCCGCGCCUgGCCGagGAGAUa -3' miRNA:   3'- cGAGUgGGGUGUGGA-UGGCggCUUUG- -5'
30697	3'	-55.6	NC_006552.1	+	49118	0.69	0.572697
	Target:  5'- ---aGCCCCAuCugCUcggagcgcuuugggGCCGCCGGGACc -3' miRNA:   3'- cgagUGGGGU-GugGA--------------UGGCGGCUUUG- -5'
30697	3'	-55.6	NC_006552.1	+	12255	0.69	0.565203
	Target:  5'- cGCcUGCgCCgGCGCCcGCCGCCGguGCg -3' miRNA:   3'- -CGaGUG-GGgUGUGGaUGGCGGCuuUG- -5'
30697	3'	-55.6	NC_006552.1	+	55898	0.69	0.554543
	Target:  5'- gGCUCGCCcucggcguccaCCAC-CCUGCuguCGCCGAAccaGCg -3' miRNA:   3'- -CGAGUGG-----------GGUGuGGAUG---GCGGCUU---UG- -5'
30697	3'	-55.6	NC_006552.1	+	13026	0.69	0.53341
	Target:  5'- cGCUCAUCgC-CGCC-AUCGCCGAAGg -3' miRNA:   3'- -CGAGUGGgGuGUGGaUGGCGGCUUUg -5'
30697	3'	-55.6	NC_006552.1	+	4599	1.1	0.000938
	Target:  5'- uGCUCACCCCACACCUACCGCCGAAACc -3' miRNA:   3'- -CGAGUGGGGUGUGGAUGGCGGCUUUG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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